Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gm2594-201ENSMUST00000214774 742 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim39Q9ESN2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm13223-201ENSMUST00000118609 747 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm13453-201ENSMUST00000118708 357 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim39Q9ESN2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms