Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Gm26308-201ENSMUST00000157768 69 ntBASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ush1cQ9ES64 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.31■□□□□ 0.04
Ush1cQ9ES64 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ush1cQ9ES64 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Gm15427-201ENSMUST00000117288 531 ntBASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Chchd1-203ENSMUST00000224633 557 ntBASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1cQ9ES64 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms