Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ube4bQ9ES00 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Mir8117-201ENSMUST00000184773 107 ntBASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Gm45747-201ENSMUST00000212203 999 ntBASIC12.82□□□□□ -0.36
Ube4bQ9ES00 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ube4bQ9ES00 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Gm17968-201ENSMUST00000194902 784 ntBASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube4bQ9ES00 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms