Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmg20aQ9DC33 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmg20aQ9DC33 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Mir5126-201ENSMUST00000175513 77 ntBASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmg20aQ9DC33 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmg20aQ9DC33 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmg20aQ9DC33 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.18□□□□□ -0.46
Hmg20aQ9DC33 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmg20aQ9DC33 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hmg20aQ9DC33 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms