Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.57■□□□□ 0.4
U2af1Q9D883 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.57■□□□□ 0.4
U2af1Q9D883 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.57■□□□□ 0.4
U2af1Q9D883 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.57■□□□□ 0.4
U2af1Q9D883 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.57■□□□□ 0.4
U2af1Q9D883 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.57■□□□□ 0.4
U2af1Q9D883 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.57■□□□□ 0.4
U2af1Q9D883 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
U2af1Q9D883 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm12203-201ENSMUST00000118235 598 ntBASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm12209-201ENSMUST00000120089 596 ntBASIC17.56■□□□□ 0.4
U2af1Q9D883 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Mir7085-201ENSMUST00000184353 66 ntBASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm29127-201ENSMUST00000188304 517 ntBASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
U2af1Q9D883 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
U2af1Q9D883 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
U2af1Q9D883 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.55■□□□□ 0.4
U2af1Q9D883 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm18062-201ENSMUST00000208020 547 ntBASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm18055-201ENSMUST00000208254 547 ntBASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.55■□□□□ 0.4
U2af1Q9D883 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Matn2-206ENSMUST00000228570 2798 ntBASIC17.55■□□□□ 0.4
U2af1Q9D883 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.55■□□□□ 0.4
U2af1Q9D883 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
U2af1Q9D883 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
U2af1Q9D883 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms