Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Gm43474-201ENSMUST00000196415 774 ntBASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 AC166997.1-201ENSMUST00000225122 572 ntBASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Nudt18-202ENSMUST00000228554 3619 ntBASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d4aQ9D7V1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d4aQ9D7V1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d4aQ9D7V1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d4aQ9D7V1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d4aQ9D7V1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sh2d4aQ9D7V1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d4aQ9D7V1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d4aQ9D7V1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms