Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf225Q9D7D1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm43104-201ENSMUST00000197234 311 ntBASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm44872-201ENSMUST00000207864 420 ntBASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf225Q9D7D1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm2288-201ENSMUST00000118560 638 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm2318-201ENSMUST00000119623 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7438-201ENSMUST00000177664 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7408-201ENSMUST00000178014 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7386-201ENSMUST00000178020 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm3657-201ENSMUST00000178170 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7415-201ENSMUST00000178205 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7398-201ENSMUST00000178589 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7391-201ENSMUST00000178680 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm7375-201ENSMUST00000179232 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm3681-201ENSMUST00000179940 639 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm18905-201ENSMUST00000205454 928 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 AC116589.3-202ENSMUST00000221770 649 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 AC116589.6-201ENSMUST00000222252 649 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 AC154747.1-201ENSMUST00000225265 239 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf225Q9D7D1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms