Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3404Q9D506 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3404Q9D506 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3404Q9D506 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.21□□□□□ -0.14
Gm3404Q9D506 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3404Q9D506 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.2□□□□□ -0.14
Gm3404Q9D506 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.2□□□□□ -0.14
Gm3404Q9D506 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.2□□□□□ -0.14
Gm3404Q9D506 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3404Q9D506 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.19□□□□□ -0.14
Gm3404Q9D506 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.19□□□□□ -0.14
Gm3404Q9D506 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Gm6983-201ENSMUST00000214912 628 ntBASIC14.19□□□□□ -0.14
Gm3404Q9D506 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.19□□□□□ -0.14
Gm3404Q9D506 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.19□□□□□ -0.14
Gm3404Q9D506 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3404Q9D506 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.18□□□□□ -0.14
Gm3404Q9D506 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.18□□□□□ -0.14
Gm3404Q9D506 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Gm38144-201ENSMUST00000192790 465 ntBASIC14.18□□□□□ -0.14
Gm3404Q9D506 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm3404Q9D506 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms