Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Stag1Q9D3E6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Stag1Q9D3E6 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Gm14723-201ENSMUST00000118686 215 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Gm27516-201ENSMUST00000184237 98 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stag1Q9D3E6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Gm43133-201ENSMUST00000197472 463 ntBASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Stag1Q9D3E6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms