Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Syt7-205ENSMUST00000224135 1557 ntBASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.55□□□□□ -0.4
Chaf1bQ9D0N7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm9719-201ENSMUST00000162765 543 ntBASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Dupd1-202ENSMUST00000224735 548 ntBASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms