Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gm15693-201ENSMUST00000120470 637 ntBASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gm27622-201ENSMUST00000183779 60 ntBASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gm7774-201ENSMUST00000200064 533 ntBASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gm5312-201ENSMUST00000203728 547 ntBASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snf8Q9CZ28 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm12585-201ENSMUST00000117307 290 ntBASIC13.78□□□□□ -0.2
Snf8Q9CZ28 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snf8Q9CZ28 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Snf8Q9CZ28 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Gm8396-201ENSMUST00000057361 823 ntBASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Snf8Q9CZ28 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms