Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim13Q9CYB0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm13015-201ENSMUST00000118674 204 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Rprl2-201ENSMUST00000157150 290 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Gm18049-201ENSMUST00000208909 581 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Mir497b-201ENSMUST00000093601 125 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim13Q9CYB0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm24513-201ENSMUST00000174964 138 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim13Q9CYB0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms