Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krt88Q9CPR6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Mir3113-201ENSMUST00000175478 76 ntBASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gm45612-201ENSMUST00000211320 160 ntBASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.06□□□□□ -0.48
Krt88Q9CPR6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms