Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim11Q99PQ2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim11Q99PQ2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim11Q99PQ2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Gm43094-201ENSMUST00000196549 921 ntBASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim11Q99PQ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm11524-201ENSMUST00000119349 807 ntBASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm15321-201ENSMUST00000121290 288 ntBASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm28760-201ENSMUST00000185995 736 ntBASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm19078-201ENSMUST00000206311 727 ntBASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim11Q99PQ2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Syt7-204ENSMUST00000223586 1344 ntBASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Gm26464-201ENSMUST00000157094 305 ntBASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Gm38144-201ENSMUST00000192790 465 ntBASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim11Q99PQ2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms