Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.1□□□□□ -0.31
Trim16Q99PP9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gm5425-201ENSMUST00000214125 459 ntBASIC13.1□□□□□ -0.31
Trim16Q99PP9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.1□□□□□ -0.31
Trim16Q99PP9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.1□□□□□ -0.31
Trim16Q99PP9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.09□□□□□ -0.31
Trim16Q99PP9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.09□□□□□ -0.31
Trim16Q99PP9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.09□□□□□ -0.31
Trim16Q99PP9 Mir6977-201ENSMUST00000184960 64 ntBASIC13.09□□□□□ -0.31
Trim16Q99PP9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim16Q99PP9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim16Q99PP9 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.08□□□□□ -0.31
Trim16Q99PP9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim16Q99PP9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim16Q99PP9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trim16Q99PP9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim16Q99PP9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim16Q99PP9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.08□□□□□ -0.31
Trim16Q99PP9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.08□□□□□ -0.32
Trim16Q99PP9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.08□□□□□ -0.32
Trim16Q99PP9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim16Q99PP9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms