Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm9358-201ENSMUST00000183067 927 ntBASIC13.28□□□□□ -0.28
Cdh23Q99PF4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm37201-201ENSMUST00000191845 523 ntBASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm9463-201ENSMUST00000206707 601 ntBASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.27□□□□□ -0.28
Cdh23Q99PF4 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.27□□□□□ -0.28
Cdh23Q99PF4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdh23Q99PF4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Gm22138-201ENSMUST00000158748 128 ntBASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdh23Q99PF4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm15711-201ENSMUST00000118889 535 ntBASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.26□□□□□ -0.29
Cdh23Q99PF4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Sybu-209ENSMUST00000228639 4113 ntBASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm32999-201ENSMUST00000192693 562 ntBASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm6722-201ENSMUST00000221586 390 ntBASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdh23Q99PF4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Gm10312-201ENSMUST00000078515 489 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms