Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm27839-201ENSMUST00000184242 106 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gtf2ird2Q99NI3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Gtf2ird2Q99NI3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms