Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm15371-201ENSMUST00000117057 784 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm1335-201ENSMUST00000121653 386 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Mir5132-201ENSMUST00000175166 71 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm29199-201ENSMUST00000187766 775 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm43758-201ENSMUST00000199500 367 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.73□□□□□ -0.53
Scrt1Q99M85 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scrt1Q99M85 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm13342-201ENSMUST00000121055 207 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm38223-201ENSMUST00000194484 695 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm6334-201ENSMUST00000207083 228 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scrt1Q99M85 Mir497b-201ENSMUST00000093601 125 ntBASIC11.72□□□□□ -0.53
Scrt1Q99M85 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms