Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm15487-201ENSMUST00000122373 465 ntBASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Gm9522-201ENSMUST00000182394 926 ntBASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Gm27838-201ENSMUST00000184829 128 ntBASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp1b1Q99LU0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm24420-201ENSMUST00000176676 59 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm5866-201ENSMUST00000177881 973 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm17795-201ENSMUST00000214505 757 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms