Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm27772-201ENSMUST00000184900 187 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Gm17837-201ENSMUST00000186435 985 ntBASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdk5rap3Q99LM2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm43575-201ENSMUST00000196420 516 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap3Q99LM2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms