Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm38158-201ENSMUST00000194617 339 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cstf1Q99LC2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Mospd4-201ENSMUST00000180618 576 ntBASIC13.35□□□□□ -0.27
Cstf1Q99LC2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Gm7046-201ENSMUST00000221351 977 ntBASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms