Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.45■□□□□ 0.06
Smc1bQ920F6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.45■□□□□ 0.06
Smc1bQ920F6 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.45■□□□□ 0.06
Smc1bQ920F6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc1bQ920F6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm37466-201ENSMUST00000195692 652 ntBASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm44397-201ENSMUST00000195950 113 ntBASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.44■□□□□ 0.06
Smc1bQ920F6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.44■□□□□ 0.06
Smc1bQ920F6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc1bQ920F6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm26461-201ENSMUST00000175064 290 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm7584-201ENSMUST00000175829 940 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Mir8109-201ENSMUST00000184375 117 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm19309-201ENSMUST00000218295 205 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm9823-201ENSMUST00000051212 327 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.43■□□□□ 0.06
Smc1bQ920F6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1bQ920F6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1bQ920F6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms