Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhac1Q91Y10 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhac1Q91Y10 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm4804-201ENSMUST00000182234 999 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm21470-201ENSMUST00000187680 696 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm10576-201ENSMUST00000191927 825 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm5425-201ENSMUST00000214125 459 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhac1Q91Y10 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm14057-201ENSMUST00000120631 482 ntBASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm20949-201ENSMUST00000206478 952 ntBASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms