Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhga4Q91XY4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Gm11524-201ENSMUST00000119349 807 ntBASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Gm12341-201ENSMUST00000119724 503 ntBASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Gm23984-201ENSMUST00000157139 203 ntBASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Mir497b-201ENSMUST00000093601 125 ntBASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhga4Q91XY4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.21□□□□□ -0.3
Pcdhga4Q91XY4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm11478-201ENSMUST00000117851 599 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm2445-201ENSMUST00000182798 989 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Mir7654-201ENSMUST00000185082 70 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm19078-201ENSMUST00000206311 727 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm5186-201ENSMUST00000218781 920 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhga4Q91XY4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhga4Q91XY4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms