Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm27772-201ENSMUST00000184900 187 ntBASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm43997-201ENSMUST00000203986 1005 ntBASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb17Q91VD8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Gm45177-201ENSMUST00000209104 2307 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Gm44090-201ENSMUST00000204669 1834 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Gm38368-201ENSMUST00000193181 1335 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC14.27□□□□□ -0.12
Pcdhb17Q91VD8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Gm18539-201ENSMUST00000204745 1090 ntBASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb17Q91VD8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm7961-201ENSMUST00000201338 1436 ntBASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm14975-201ENSMUST00000118741 664 ntBASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm13341-201ENSMUST00000120780 672 ntBASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm6140-201ENSMUST00000192494 966 ntBASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb17Q91VD8 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms