Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.2□□□□□ -0.3
Vsx1Q91V10 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm16379-201ENSMUST00000161469 348 ntBASIC13.2□□□□□ -0.3
Vsx1Q91V10 Mir6979-201ENSMUST00000183927 56 ntBASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm8762-201ENSMUST00000193486 339 ntBASIC13.2□□□□□ -0.3
Vsx1Q91V10 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm7046-201ENSMUST00000221351 977 ntBASIC13.2□□□□□ -0.3
Vsx1Q91V10 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx1Q91V10 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Mir698-201ENSMUST00000102164 109 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm4986-201ENSMUST00000119731 549 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm37489-201ENSMUST00000191883 159 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.19□□□□□ -0.3
Vsx1Q91V10 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vsx1Q91V10 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.18□□□□□ -0.3
Vsx1Q91V10 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms