Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.5■□□□□ 0.07
StrcQ8VIM6 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.5■□□□□ 0.07
StrcQ8VIM6 Gm1821-202ENSMUST00000227415 750 ntBASIC15.5■□□□□ 0.07
StrcQ8VIM6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
StrcQ8VIM6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gm8199-201ENSMUST00000121323 823 ntBASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gm14460-201ENSMUST00000121511 639 ntBASIC15.49■□□□□ 0.07
StrcQ8VIM6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
StrcQ8VIM6 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.48■□□□□ 0.07
StrcQ8VIM6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.48■□□□□ 0.07
StrcQ8VIM6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.48■□□□□ 0.07
StrcQ8VIM6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
StrcQ8VIM6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.47■□□□□ 0.07
StrcQ8VIM6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.47■□□□□ 0.07
StrcQ8VIM6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
StrcQ8VIM6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms