Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.02□□□□□ -0.49
Odf4Q8VI88 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm28760-201ENSMUST00000185995 736 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm28631-201ENSMUST00000190740 334 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm8515-201ENSMUST00000194852 576 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm18041-201ENSMUST00000218210 618 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm9797-201ENSMUST00000052902 613 ntBASIC12.01□□□□□ -0.49
Odf4Q8VI88 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Odf4Q8VI88 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12□□□□□ -0.49
Odf4Q8VI88 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm15393-201ENSMUST00000120499 219 ntBASIC12□□□□□ -0.49
Odf4Q8VI88 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12□□□□□ -0.49
Odf4Q8VI88 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 AC154239.3-201ENSMUST00000226933 674 ntBASIC12□□□□□ -0.49
Odf4Q8VI88 AC156016.3-201ENSMUST00000228623 344 ntBASIC12□□□□□ -0.49
Odf4Q8VI88 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12□□□□□ -0.49
Odf4Q8VI88 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12□□□□□ -0.49
Odf4Q8VI88 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12□□□□□ -0.49
Odf4Q8VI88 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12□□□□□ -0.49
Odf4Q8VI88 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Odf4Q8VI88 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Odf4Q8VI88 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms