Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Gm17330-201ENSMUST00000221047 165 ntBASIC13.86□□□□□ -0.19
Trim60Q8VI40 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.86□□□□□ -0.19
Trim60Q8VI40 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim60Q8VI40 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.85□□□□□ -0.19
Trim60Q8VI40 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Mir7221-201ENSMUST00000184009 72 ntBASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm6888-201ENSMUST00000221983 706 ntBASIC13.85□□□□□ -0.19
Trim60Q8VI40 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.85□□□□□ -0.19
Trim60Q8VI40 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim60Q8VI40 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm13453-201ENSMUST00000118708 357 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm22175-201ENSMUST00000175007 78 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm45841-201ENSMUST00000207700 164 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.84□□□□□ -0.19
Trim60Q8VI40 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim60Q8VI40 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim60Q8VI40 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim60Q8VI40 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim60Q8VI40 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.83□□□□□ -0.2
Trim60Q8VI40 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim60Q8VI40 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms