Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vps4aQ8VEJ9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Mir6420-201ENSMUST00000185032 102 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm43630-201ENSMUST00000201550 776 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4aQ8VEJ9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vps4aQ8VEJ9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Gm9522-201ENSMUST00000182394 926 ntBASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms