Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm27631-201ENSMUST00000184163 466 ntBASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gm45453-201ENSMUST00000211758 853 ntBASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpa1Q8VEE4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gm14494-201ENSMUST00000118786 435 ntBASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gm17271-201ENSMUST00000165535 355 ntBASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.49□□□□□ -0.25
Rpa1Q8VEE4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rpa1Q8VEE4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms