Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm13612-201ENSMUST00000119276 390 ntBASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 AY702102-202ENSMUST00000194651 1173 ntBASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndc1Q8VCB1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm7561-201ENSMUST00000211203 886 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm6091-201ENSMUST00000098307 165 ntBASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ndc1Q8VCB1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms