Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gm15460-201ENSMUST00000118147 391 ntBASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.93□□□□□ -0.34
Rnf8Q8VC56 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.93□□□□□ -0.34
Rnf8Q8VC56 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf8Q8VC56 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gm14719-201ENSMUST00000121891 340 ntBASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gm43703-201ENSMUST00000200523 763 ntBASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf8Q8VC56 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Gm12151-201ENSMUST00000121374 290 ntBASIC12.91□□□□□ -0.34
Rnf8Q8VC56 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Gm24694-201ENSMUST00000180054 110 ntBASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Gm27663-201ENSMUST00000184839 110 ntBASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rnf8Q8VC56 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms