Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Itm2b-204ENSMUST00000228637 783 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.68□□□□□ -0.06
Rpap2Q8VC34 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gm9908-201ENSMUST00000211534 448 ntBASIC14.67□□□□□ -0.06
Rpap2Q8VC34 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rpap2Q8VC34 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Gm12928-201ENSMUST00000117115 573 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Gm6447-201ENSMUST00000118905 835 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Gm8463-201ENSMUST00000208573 613 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpap2Q8VC34 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms