Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm15467-201ENSMUST00000120582 445 ntBASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm13385-201ENSMUST00000121089 220 ntBASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nudcd3Q8R1N4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nudcd3Q8R1N4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms