Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrrtm1Q8K377 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gm14494-201ENSMUST00000118786 435 ntBASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Gm10175-201ENSMUST00000086013 645 ntBASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrrtm1Q8K377 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.46□□□□□ -0.57
Lrrtm1Q8K377 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms