Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CroccQ8CJ40 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CroccQ8CJ40 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.8□□□□□ -0.36
CroccQ8CJ40 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CroccQ8CJ40 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.79□□□□□ -0.36
CroccQ8CJ40 Mir7654-201ENSMUST00000185082 70 ntBASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
CroccQ8CJ40 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CroccQ8CJ40 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.79□□□□□ -0.36
CroccQ8CJ40 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CroccQ8CJ40 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm12490-201ENSMUST00000120255 560 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm11918-201ENSMUST00000121660 179 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm27701-201ENSMUST00000184498 110 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm38144-201ENSMUST00000192790 465 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.78□□□□□ -0.36
CroccQ8CJ40 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CroccQ8CJ40 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CroccQ8CJ40 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.77□□□□□ -0.37
CroccQ8CJ40 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.77□□□□□ -0.37
CroccQ8CJ40 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CroccQ8CJ40 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CroccQ8CJ40 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms