Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbm28Q8CGC6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Proscos-202ENSMUST00000178990 666 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Gm38144-201ENSMUST00000192790 465 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbm28Q8CGC6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Itm2b-204ENSMUST00000228637 783 ntBASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Rbm28Q8CGC6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm8062-201ENSMUST00000139696 444 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm22331-201ENSMUST00000158066 136 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm8810-201ENSMUST00000172895 754 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm37424-201ENSMUST00000191727 561 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm6007-201ENSMUST00000208170 823 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbm28Q8CGC6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbm28Q8CGC6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rbm28Q8CGC6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms