Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm7774-201ENSMUST00000200064 533 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc28aQ8CEI3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc28aQ8CEI3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Mir7221-201ENSMUST00000184009 72 ntBASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 AW822252-206ENSMUST00000208904 237 ntBASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28aQ8CEI3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms