Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm25911-201ENSMUST00000157621 56 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm4804-201ENSMUST00000182234 999 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Mir6990-201ENSMUST00000183724 91 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm10766-202ENSMUST00000194123 606 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm43125-201ENSMUST00000201724 730 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.99□□□□□ -0.49
Lysmd4Q8CC84 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm27525-201ENSMUST00000184465 107 ntBASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd4Q8CC84 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lysmd4Q8CC84 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms