Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Gm4271-201ENSMUST00000174444 973 ntBASIC15.46■□□□□ 0.07
Shisa4Q8CA71 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shisa4Q8CA71 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shisa4Q8CA71 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Mir3547-201ENSMUST00000175461 88 ntBASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm28693-202ENSMUST00000190758 331 ntBASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm37922-201ENSMUST00000195596 455 ntBASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm10146-201ENSMUST00000072739 309 ntBASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shisa4Q8CA71 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Gm27682-201ENSMUST00000183930 110 ntBASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.44■□□□□ 0.06
Shisa4Q8CA71 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms