Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.57■□□□□ 0.08
Alx1Q8C8B0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm8805-201ENSMUST00000117848 313 ntBASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm13369-201ENSMUST00000119442 987 ntBASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm19931-201ENSMUST00000198920 368 ntBASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alx1Q8C8B0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx1Q8C8B0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Gm15824-201ENSMUST00000119516 955 ntBASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.54■□□□□ 0.08
Alx1Q8C8B0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms