Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mir874-201ENSMUST00000104769 76 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.75□□□□□ -0.05
Trim9Q8C7M3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim9Q8C7M3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms