Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gm8396-201ENSMUST00000057361 823 ntBASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tsen54Q8C2A2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tsen54Q8C2A2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm2810-201ENSMUST00000118681 990 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm2445-201ENSMUST00000182798 989 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm38225-201ENSMUST00000194001 393 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm43125-201ENSMUST00000201724 730 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tsen54Q8C2A2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tsen54Q8C2A2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms