Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm44882-201ENSMUST00000205702 802 ntBASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim47Q8C0E3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim47Q8C0E3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim47Q8C0E3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim47Q8C0E3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim47Q8C0E3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim47Q8C0E3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim47Q8C0E3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim47Q8C0E3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms