Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Mir874-201ENSMUST00000104769 76 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm18307-201ENSMUST00000206864 949 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm18624-201ENSMUST00000220966 658 ntBASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.8□□□□□ -0.2
Trub1Q8C0D0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Mir7654-201ENSMUST00000185082 70 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm37917-201ENSMUST00000194711 392 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Gm26315-201ENSMUST00000083890 321 ntBASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trub1Q8C0D0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms