Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm19184-201ENSMUST00000196798 928 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm7029-201ENSMUST00000173226 450 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm37008-201ENSMUST00000195712 319 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm7399-201ENSMUST00000032395 858 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sh3rf2Q8BZT2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf2Q8BZT2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm15198-201ENSMUST00000117283 177 ntBASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm8805-201ENSMUST00000117848 313 ntBASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm6013-201ENSMUST00000212264 699 ntBASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Gm9823-201ENSMUST00000051212 327 ntBASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf2Q8BZT2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms