Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col16a1Q8BLX7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Gm16296-201ENSMUST00000159905 325 ntBASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Col16a1Q8BLX7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col16a1Q8BLX7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm24749-201ENSMUST00000157838 343 ntBASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm24845-201ENSMUST00000158034 109 ntBASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm37201-201ENSMUST00000191845 523 ntBASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col16a1Q8BLX7 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm45118-201ENSMUST00000208928 825 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12616-201ENSMUST00000118594 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12624-201ENSMUST00000177615 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12621-201ENSMUST00000177760 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12615-201ENSMUST00000177970 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12622-201ENSMUST00000177975 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12627-201ENSMUST00000178412 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12625-201ENSMUST00000179122 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12614-201ENSMUST00000179586 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm12613-201ENSMUST00000180323 382 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms