Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.62□□□□□ -0.55
Srrm4Q8BKA3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm12138-201ENSMUST00000122180 951 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm45384-201ENSMUST00000210451 277 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm7653-201ENSMUST00000214567 508 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.61□□□□□ -0.55
Srrm4Q8BKA3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Gm15770-201ENSMUST00000117498 584 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Gm27701-201ENSMUST00000184498 110 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srrm4Q8BKA3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms