Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm12403-201ENSMUST00000121384 959 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm1335-201ENSMUST00000121653 386 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp1Q8BJQ2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm18054-201ENSMUST00000207539 555 ntBASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Olfr582-201ENSMUST00000098212 960 ntBASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp1Q8BJQ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Usp1Q8BJQ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms